From: Predictive biomarkers for anti-TNF alpha therapy in IBD patients
Candidate gene | Anti-TNF therapy: UC patients | |
---|---|---|
Genetic variants NR vs R | Expression NR vs R | |
• TLR2 | rs3804099 [T/C] | – |
• TLR2 | rs11938228 [C/A] | – |
• TLR2 | rs1816702 [T/C] | – |
• TLR2 | rs4696480 [A/T] | – |
• TLR4 | rs5030728 [G/A] | – |
• TLR9 | rs352139 [G/A] | – |
• LY96 | rs11465996 [G/C] | – |
• IFNG | rs2430561 [A/T] | – |
• IL17A | rs2275913 [A/G] | – |
Mucosal transcripts • TNF-α | – | ↑ |
• IL-17A | – | ↑ |
• IFN-γ | – | ↑ |
• OSM | – | ↑ |
• IL-7Ra | – | ↑ |
• miRNAs | – | ↑ |
• TREM1 | – | ↓ |
HP | – | ↑ |
CD177 |  | ↑ |
GPR84 |  | ↑ |
CST7 |  | ↑ |
S100A12 |  | ↑ |
ARG1 |  | ↑ |
ANXA3 |  | ↑ |
ANKRD22 |  | ↑ |
Genomic |  | ↑ |