From: Predictive biomarkers for anti-TNF alpha therapy in IBD patients
Candidate gene | Anti-TNF therapy: CD patients | |
---|---|---|
Genetic variants NR vs R | Expression NR vs R | |
• TNFSF4, TNFSF18 | rs116724455[C/T] | – |
• PLIN2, HAUS6 | rs2228416 [T/C] | – |
• LTF, CCR5, CCRL2 | rs762787 [T/C] | – |
• KLHL1 | rs9572250 [G/A] | – |
• PROX1, RPS6KC1 | rs144256942 [G/A] | – |
• RORB, TRPM6 | rs523781[G/C] | – |
• TLR2 | rs3804099 [C/T] | – |
• TLR2 | rs11938228 [C/A] | – |
• TLR2 | rs1816702 [T/C] | – |
• TLR2 | rs4696480 [A/T] | – |
• TLR4 | rs5030728 [G/A] | – |
• TLR9 | rs352139 [G/A] | – |
• NOD2 | rs2066844 [C/T] | – |
• NOD2 | rs2066845 [G/C] | – |
• NOD2 | rs41450053[C/G] | – |
• LY96 | rs11465996 [G/C] | – |
• IFNG | rs2430561 [A/T] | – |
• IL17A | rs2275913 [A/G] | – |
Fas ligand | 843 CC/TT | – |
Caspase-9 | 93 TT/CC | – |
Mucosal transcripts • TNF-α | – | ↑ |
• IL-17A | – | ↑ |
• OSM | – | ↑ |
• IL-7Ra | – | ↑ |
• miRNAs | – | ↑ |
• TREM1 | – | ↓ |
Proteomics | – | ↑ |
Genomic | – | ↑ |