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Table 6 Isolation method characteristics

From: Qualitative and quantitative comparison of cell-free DNA and cell-free fetal DNA isolation by four (semi-)automated extraction methods: impact in two clinical applications: chimerism quantification and noninvasive prenatal diagnosis

Manufacturer

Roche

ID-Solution

Taigen

Perkin Elmer

Robot

MagNA Pure 24 System

IDEAL

LabTurbo 24 AB

Chemagic 360D

A

B

C

D

Product

MagNA Pure 24

Total NA Isolation Kit

IDXTRACT-MAG

Virus combo kit 24C-LVX480-1000

NextPrep-Mag cf DNA isolation kit

Type

Bead based

Bead based

Column

Bead based

Sample volume (mL)

2–4

0.5–5

0.3–3

0.5–10

Elution volume (µL)

30–200

30–120 (adaptable)

30–200

30–100

Level of automation

Full

Semi

Full

Semi

Manual pre processing

 

Reconstitute the PK and incubation (5 min at room temperature), addition of beads + buffers (incubation with vigorous shaking for 30 min at 56 °C). Adaptable distribution of buffers and elution reagents

Wash preparation: addition of EtOH

Add beads, add elution reagent in a bar or tube, reconstitute the Proteinase K

Hands-on-time (min)

0

45

5

20

Automated runtime (min)

90

45

70

70

Total runtime (min)

90

90

75

90

Samples

24

24

24

12

Cost of the instrument

+

+

+

++

Cost of consumables

++

+

++

+

Dimensions (cm)

 Height × width × length

77.5 × 76.5 × 89.9

37 × 57 × 72

87 × 74 × 65

90 × 82 × 90